Hi, I’m Olena-Maria πŸ¦„

πŸ’» Computational biologist and PhD candidate specialising in single-cell transcriptomics, long-read sequencing and reproducible bioinformatics.

🧬 I want to use omics to understand disease and improve human health. Precision Medicine is the Goal!

πŸ—‚οΈ Organised to the last detail. Documenting life as I go!

🎯 When I take on a task, I deliver. With precision!

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A little message in the bases 5β€² TGC CGT GAA GCT ACC GAA 3β€² Decode message πŸ–±οΈ Hide message πŸ–±οΈ

DNA β†’ RNA β†’ AMINO ACIDS

RNA Β· 5β€² β†’ 3β€² UGC CGU GAA GCU ACC GAA

  1. UGC Cysteine Cys C
  2. CGU Arginine Arg R
  3. GAA Glutamate Glu E
  4. GCU Alanine Ala A
  5. ACC Threonine Thr T
  6. GAA Glutamate Glu E

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My PhD combines single-cell transcriptomics with SPLiT-seq long-read protocol development to investigate planarian regeneration and transcript diversity. To our knowledge this is the first such protocol developed.

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At Oxford Nanopore Technologies, I generated ultra-long and Pore-C datasets and worked on the telomere-to-telomere assembly of a cancerous human cell line.

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I use Python, R, Unix, Scanpy and Nextflow in my computational work, with an emphasis on reproducible bioinformatics analyses.

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My PhD has been one big protocol development journey, connecting laboratory decisions with downstream sequencing analysis.

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My MSc in Genomic Medicine included an internship at the Manchester Centre for Genomic Research, where I investigated the relationship between genotype and phenotype in patients with Gorlin syndrome using Sanger sequencing.

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At Procter & Gamble, I worked on antimicrobial formulations and managed a biosafety level 2 laboratory. I am a named co-inventor on a published patent application.

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